Revision 1
#39172
Store at -20C
CD11b/ITGAM (E4K8C) & CO-0083-488 SignalStar™ Oligo-Antibody Pair
1 Kit
(10 slides)
UniProt ID:
#P05555
Entrez-Gene Id:
#16409
877-616-CELL (2355)
877-678-TECH (8324)
3 Trask Lane | Danvers | Massachusetts | 01923 | USA
For Research Use Only. Not for Use in Diagnostic Procedures.
Product Includes | Product # | Volume | Reactivity | Isotype |
---|---|---|---|---|
CD11b/ITGAM (E4K8C) Rabbit mAb (SignalStar™ Conjugate 0083) | 86325 | 50 µl | M | Rabbit IgG |
Complementary Oligo (CO-0083-488) | 58938 | 22 µl |
Storage
Description
SignalStar Oligo-Antibody Pairs are compatible with the SignalStar Multiplex IHC Buffer Kits for use in fluorescent multiplex imaging experiments. This product includes the oligo-conjugated antibodies and complementary oligos required for labeling your target protein on up to 10 slides. SignalStar Multiplex IHC Buffer Kits are required to amplify and image the target signal. Multiple oligo-antibody pairs can be conveniently combined into a multiplex panel using the SignalStar Multiplex IHC Panel Builder. SignalStar Multiplex IHC Kits & Reagents are not compatible with all of Cell Signaling Technology® products and protocols that are recommended for use in immunohistochemical assays.
Specificity/Sensitivity
Source / Purification
Background
Species Reactivity
Species reactivity is determined by testing in at least one approved application (e.g., western blot).
Trademarks and Patents
Cell Signaling Technology is a trademark of Cell Signaling Technology, Inc.
SignalStar is a registered trademark of Cell Signaling Technology, Inc.
U.S. Patent No. 10,781,477, foreign equivalents, and child patents deriving therefrom.
All other trademarks are the property of their respective owners. Visit cellsignal.com/trademarks for more information.
限制使用
除非 CST 的合法授书代表以书面形式书行明确同意,否书以下条款适用于 CST、其关书方或分书商提供的书品。 任何书充本条款或与本条款不同的客书条款和条件,除非书 CST 的合法授书代表以书面形式书独接受, 否书均被拒书,并且无效。
专品专有“专供研究使用”的专专或专似的专专声明, 且未专得美国食品和专品管理局或其他外国或国内专管机专专专任何用途的批准、准专或专可。客专不得将任何专品用于任何专断或治专目的, 或以任何不符合专专声明的方式使用专品。CST 专售或专可的专品提供专作专最专用专的客专,且专用于研专用途。将专品用于专断、专防或治专目的, 或专专售(专独或作专专成)或其他商专目的而专专专品,均需要 CST 的专独专可。客专:(a) 不得专独或与其他材料专合向任何第三方出售、专可、 出借、捐专或以其他方式专专或提供任何专品,或使用专品制造任何商专专品,(b) 不得复制、修改、逆向工程、反专专、 反专专专品或以其他方式专专专专专品的基专专专或技专,或使用专品开专任何与 CST 的专品或服专专争的专品或服专, (c) 不得更改或专除专品上的任何商专、商品名称、徽专、专利或版专声明或专专,(d) 只能根据 CST 的专品专售条款和任何适用文档使用专品 , (e) 专遵守客专与专品一起使用的任何第三方专品或服专的任何专可、服专条款或专似专专
Revision 1
Revision 1
Revision 1
Revision 1
Product Information:
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Storage: Store all kit components at -20°C. Stability: All components in this kit are stable for at least 12 months when stored at the recommended temperature. Do not exceed 5 freeze/thaw cycles. Application: The SignalStar kits are intended for fluorescent multiplex immunohistochemistry. Slide Number: This kit contains sufficient materials for the staining of 10 slides. |

Contents
- 1 Introduction: The SignalStar™ Staining Methodology
- 2 Solutions and Reagents
- 3 Important Considerations Before You Begin
- 4 BOND RX Autostainer Setup
- 5 SignalStar Imaging Round 1: Solution Preparation
- 6 SignalStar Imaging Round 1: BOND RX Protocol for Use
- 7 SignalStar Imaging Round 2: Solution Preparation
- 7.1 Imaging Round 2: SignalStar Solution
- 7.2 Imaging Round 2: SignalStar Amplification Solution 1
- 7.3 Imaging Round 2: SignalStar Amplification Solution 2
- 7.4 Imaging Round 2: SignalStar Ligation Solution
- 7.5 Imaging Round 2: SignalStar Fluorescent Removal Solution
- 7.6 Additional Required Solutions Not Included
- 8 SignalStar Imaging Round 2: BOND RX Protocol for Use
- 9 User Worksheets
- 10 Appendix
1 Introduction: The SignalStar™ Staining Methodology
SignalStar multiplex immunohistochemistry (mIHC) is a tool that employs antibodies, oligonucleotides (oligos), and fluorophores to interrogate the cellular presence, location, function, and biomarker co-expression patterns. SignalStar technology enables the detection of multiple phenotypic and functional targets while maintaining spatial context and tissue architecture. These insights are essential for understanding how cells organize and interact to influence the tissue microenvironment and drive disease progression and response to therapy.
The power of the SignalStar system lies in the design of the SignalStar antibodies. These antibodies have been rigorously validated for use in formalin-fixed, paraffin-embedded (FFPE) tissues, and subsequently conjugated to unique oligo tags using site-specific conjugation and thorough purification methodologies. Using a highly specific network of complementary oligos and fluorophores, scientists can amplify the signal for 3-8 targets, even if they are in low abundance.

Figure 1. All antibodies in your plex size of choice (3-8 maximum unique oligo-conjugated antibodies) are added in cocktail in one primary incubation step. Complementary oligos with fluorescent dyes (channels: 488, 594, 647, and 750) amplify the signal of up to 4 oligo-conjugated antibodies in the first round of imaging by building oligo-fluorophore constructs attached to the antibody. If the plex size is greater than 4, the first round of oligos and fluorophores are gently removed, and a second round of amplification is performed to visualize up to 4 additional oligo-conjugated antibodies; the complementary oligo system and the use of the fluorophore removal process enables a second round of antibodies to be amplified from the same substrate, without cross-reactivity. The 2 images are then aligned and fused computationally with either proprietary or open-source software to generate an image consisting of up to 8 targets.
2 Solutions and Reagents
2.1 Included Kit Components
Materials Included in Kit |
Up to 8 SignalStar oligo-conjugated antibodies (see below) |
Up to 8 SignalStar complementary oligos (see below) |
SignalStar™ Antibody Diluent A |
SignalStar™ Antibody Diluent B |
SignalStar™ Amplification Buffer A |
SignalStar™ Amplification Buffer B |
SignalStar™ Amplification Oligo Set A: |
488 |
594 |
647 |
750 |
SignalStar™ Amplification Oligo Set B: |
488 |
594 |
647 |
750 |
SignalStar™ Ligation Buffer |
T4 DNA Ligase (5 U/µL) |
ATP (100 mM) |
10X dsDNase Buffer |
dsDNase |
Included are up to 8 SignalStar oligo-conjugated antibodies (A) and up to 8 SignalStar complementary oligos (B) selected at the time of order and provided in sleeves with their respective oligo-antibody pair (C). See example below.
2.2 Required Reagents Not Included
- Tris Buffered Saline with Tween 20 (TBST-10X) #9997
- DAPI #4083
- ProLong Gold Antifade Reagent #9071
- Nuclease-free Water #12931
- 10% Neutral Buffered Formalin
- Low Retention Pipette Tips
2.3 Required Reagents Not Included - Available from Leica Biosystems
- BOND Research Detection System #DS9455
- BOND Aspirating Probe Cleaning Kit #CS9100
- BOND Titration Kit (10 containers, 50 inserts) #OPT9049
- BOND Open Containers 30 mL (10 pack) #OP309700
- BOND Open Containers 7 mL (10 pack) #OP79193
- BOND Universal Covertiles (160 pack) #S21.4611
- BOND TM Epitope Retrieval 2-1 L (RTU) #AR9640
- BOND Dewax Solution 1 L (RTU) #AR9222
- BOND Wash Solution 10X Concentrate, 1L #AR9590
3 Important Considerations Before You Begin
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DO NOT COMBINE COMPLEMENTARY OLIGOS OF THE SAME FLUORESCENT CHANNEL. Imaging rounds can contain only 1 complementary oligo for each fluorescent channel. DO NOT COMBINE COMPLEMENTARY OLIGOS SPECIFIC TO THE SAME FLUORESCENT CHANNEL IN THE SAME IMAGING ROUND, AS IT WILL RENDER THE ASSAY RESULTS UNINTERPRETABLE. |
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DO NOT COMBINE ANTIBODIES FROM DIFFERENT PANELS. If you are running multiple panels simultaneously, a separate antibody/complementary oligo mix must be generated for each unique panel. |
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Use the BOND RX software to set up protocols and reagents PRIOR to creating your solutions. Create containers, protocols, and a new BOND Research Detection System. A BOND Research Detection System is required to run this protocol. |
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After performing each round of the SignalStar assay, always run an aspirating probe cleaning on the BOND RX. |
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Please confirm whether your SignalStar panel design requires 2 rounds of imaging. Utilize the Example SignalStar Panel Design and SignalStar Panel Design Worksheet in section 10.1 and 9.1 of this document for guidance and assistance. |
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Confirm your microscope can detect the fluorophores provided in this kit. When imaging, there are 4 fluorescent channels in addition to DAPI that need to be acquired. |
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It is recommended that a spectral library be created by imaging single stained slides for the spectra described above. This will enable better unmixing to help minimize the possibility of spectral bleed-through. |
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Usage of a DAPI concentrate is recommended rather than a mount that contains DAPI. Bright DAPI staining facilitates better image alignment. |
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Fluorescent signal may be variable or diminished if solutions are not sufficiently mixed. Prior to usage, spin down each reagent at 1,000 rpm for 30 sec, then slowly mix by pipetting. When using reagents, pipette slowly to ensure accuracy. Store all SignalStar kit components on ice when not in use. SignalStar solutions should be used promptly once all reagents have been combined for the run. |
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Optimally, slides should be imaged within 8 hr of staining completion. Fluorescent signal may be diminished if slides are not imaged within this timeframe. |
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Results are not guaranteed if there is any deviation from this protocol. The SignalStar protocol was developed and optimized with the designated antigen retrieval and staining steps. |
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The usage of a positive control slide is recommended. A tissue upon which chromogenic staining has confirmed the presence of all targets in the multiplex panel should be included in each run. |
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It is recommended that each antibody be used at 1:100. However, enough antibody reagent is supplied for usage at either 1:50 or 1:200 dilutions. |
4 BOND RX Autostainer Setup
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Use the BOND RX software to set up protocols and reagents PRIOR to creating your solutions. Requires BOND RX software version 7.0 or greater. |
4.1 New Reagent Creation on BOND RX Autostainer
The following reagents must be created on the BOND RX software for the SignalStar assay:
BOND Titration Container
1. MARKER (= SignalStar Staining Solution) |
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2. SignalStar Amplification Solution 1 |
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3. SignalStar Amplification Solution 2 |
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4. SignalStar Ligation Solution |
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5. SignalStar Fluorescent Removal Solution |
BOND 7 mL Open Container
6. 10% Neutral Buffered Formalin |
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Select “Hazardous” when creating 10% Neutral Buffered Formalin reagent to ensure the waste is disposed of properly. |
BOND 30 mL Open Container
7. 0.1X TBST |
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8. 1X TBST (Required for linking to BOND Research Detection System) |
4.2 BOND Research Detection System Setup
1. Create a new BOND Research Detection System named "CST SignalStar." |
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2. Link 30 mL open container with 1X TBST to the CST SignalStar BOND Research Detection System. |
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The open container in Step 2 must be named distinctly (e.g., ‘1X TBST' instead of '0.1X TBST'). |
4.3 Create BOND RX Protocols for SignalStar Imaging Round 1 and Imaging Round 2
1. In the BOND RX software, select the "Protocol Setup" tab. |
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2. Select "*IF Protocol" (ensure that Leica is listed in the "Modified by" column). |
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3. Copy protocol and rename it "CST SignalStar Imaging Round 1." Add the abbreviated name "CST Rd1." |
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4. Select "Show wash steps." |
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6. Select "CST SignalStar" as preferred Detection System. |
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7. Select "Create Protocol." |
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8. Click Save and click Yes to acknowledge the caution message. |
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9. Create a copy of "CST SignalStar Imaging Round 1" protocol. |
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10. Change the name of the copy to "CST SignalStar Imaging Round 2" with the abbreviated name "CST Rd2." |
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11. Select "Show wash steps." |
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13. Select "CST SignalStar" as preferred Detection System. |
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14. Select "Create Protocol." |
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15. Click Save and click Yes to acknowledge the caution message. |
5 SignalStar Imaging Round 1: Solution Preparation
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Each reagent MUST be used in the appropriate BOND RX container or insert from the BOND Titration Kit (#OPT9049) for the assay to run properly. See the table below for the number of containers or inserts necessary to perform the SignalStar assay on the BOND RX autostainer. |
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DO NOT OVERFILL OPEN CONTAINERS. BOND RX autostainer will consider containers to be "Empty" if they are overfilled. |
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5.1 Imaging Round 1: SignalStar Solution
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Once prepared, the SignalStar Imaging Round 1 Solution should contain ALL antibodies (up to 8) ordered with your kit (including those for Imaging Round 1 and Imaging Round 2) and the complementary oligos for Imaging Round 1. Utilize the Example SignalStar Panel Design and SignalStar Panel Design Worksheet in section 10.1 and 9.1 of this document for guidance and assistance. |
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DO NOT COMBINE COMPLEMENTARY OLIGOS OF THE SAME FLUORESCENT CHANNEL. |
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Prepare solutions using low retention pipette tips and rotate end-over-end for 20 min at room temperature. Pipette slowly into BOND 6 mL Titration Insert to ensure accuracy and avoid generating any bubbles. Store all SignalStar kit components on ice when preparing solutions. SignalStar solutions should be used promptly once all reagents have been combined for the run. |
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5.2 Imaging Round 1: SignalStar Amplification Solution 1
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Prepare solutions using low retention pipette tips and rotate end-over-end for 20 min at room temperature. Pipette slowly into BOND 6 mL Titration Insert to ensure accuracy and avoid generating any bubbles. Store all SignalStar kit components on ice when preparing solutions. SignalStar solutions should be used promptly once all reagents have been combined for the run. |
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For a 10 slide run, make up the total volume in a conical tube, rotate for 20 min, then divide evenly among 2 titration inserts. |
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5.3 Imaging Round 1: SignalStar Amplification Solution 2
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Prepare solutions using low retention pipette tips and rotate end-over-end for 20 min at room temperature. Pipette slowly into BOND 6 mL Titration Insert to ensure accuracy and avoid generating any bubbles. Store all SignalStar kit components on ice when preparing solutions. SignalStar solutions should be used promptly once all reagents have been combined for the run. |
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For a 10 slide run, make up the total volume in a conical tube, rotate for 20 min, then divide evenly among 2 titration inserts. |
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5.4 Imaging Round 1: SignalStar Ligation Solution
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Combine the following reagents in one BOND Titration Insert. Cover with parafilm and vortex for 10 sec. Store all SignalStar kit components on ice when preparing solutions. SignalStar solutions should be used promptly once all reagents have been combined for the run. |
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5.5 Additional Required Solutions Not Included
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6 SignalStar Imaging Round 1: BOND RX Protocol for Use
6.1 Slide Baking
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Slide baking can be performed the day before you begin your experiment. This step allows for the paraffin wax to melt. |
1. Incubate slides for 30 min at 60°C. |
6.2 Running the BOND RX Protocol
2. In the BOND RX software, create study and add slides. | |
3. When "adding slides," use the below selections for Tissue Preparation on BOND:
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4. Select "SignalStar Imaging Round 1" as the protocol and "HIER ER2 40 min" for each slide. | |
5. Print labels, apply to slides, and add slides to the BOND slide tray. | |
6. Place BOND covertiles on slides, ensuring that they are properly seated in the tray. | |
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It is good practice to confirm that each step in the SignalStar Imaging Round 1 protocol is correct. Please use the checklist in section 9.2 to assist in creating your protocol. |
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Ensure that selected 0.1X TBST washes listed below are set to "Open." Fluorescent signals may be variable or diminished if washes are not "Open." Confirm that there are a total of 6 SignalStar Amplification Solution 1 steps and 6 SignalStar Amplification Solution 2 steps. |
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Confirm the bulk Bond Wash Solution container is full, and the waste containers are empty. |
7. Start BOND RX run. | |
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Immediately start the BOND RX staining run, do not use a delayed start. Slides can sit overnight on the BOND RX autostainer once staining is complete. |
8. Remove slides from the BOND RX autostainer and place into 0.1X TBST. | |
9. Run aspirating probe cleaning run on the BOND RX autostainer. Clean covertiles as per routine procedures. | |
10. Prepare DAPI #4083 solution according to datasheet instructions. | |
11. Counterstain with DAPI solution. | |
12. Immerse slides in 0.1X TBST for 30 sec. | |
13. Mount slides with ProLong Gold Antifade Reagent #9071. | |
14. Image slides within 8 hr. | |
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Do not let slides dry out at any point once they are deparaffinized or have had coverslips removed. |
7 SignalStar Imaging Round 2: Solution Preparation
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Each reagent MUST be used in the appropriate BOND RX container or insert from the BOND Titration Kit (#OPT9049) for the assay to run properly. See the table below for the number of containers or inserts necessary to perform the SignalStar assay on the BOND RX autostainer. |
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DO NOT OVERFILL OPEN CONTAINERS. BOND RX autostainer will consider containers to be "Empty" if they are overfilled. |
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7.1 Imaging Round 2: SignalStar Solution
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Once prepared, the SignalStar Imaging Round 2 Solution should contain the complementary oligos for Imaging Round 2. Utilize the Example SignalStar Panel Design and SignalStar Panel Design Worksheet in section 10.1 and 9.1 of this document for guidance and assistance. |
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DO NOT COMBINE COMPLEMENTARY OLIGOS OF THE SAME FLUORESCENT CHANNEL. |
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Prepare solutions using low retention pipette tips and rotate end-over-end for 20 min at room temperature. Pipette slowly into BOND 6 mL Titration Insert to ensure accuracy and avoid generating any bubbles. Store all SignalStar kit components on ice when preparing solutions. SignalStar solutions should be used promptly once all reagents have been combined for the run. |
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7.2 Imaging Round 2: SignalStar Amplification Solution 1
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Prepare solutions using low retention pipette tips and rotate end-over-end for 20 min at room temperature. Pipette slowly into BOND 6 mL Titration Insert to ensure accuracy and avoid generating any bubbles. Store all SignalStar kit components on ice when preparing solutions. SignalStar solutions should be used promptly once all reagents have been combined for the run. |
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For a 10 slide run, make up the total volume in a conical tube, rotate for 20 min, then divide evenly among 2 titration inserts. |
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7.3 Imaging Round 2: SignalStar Amplification Solution 2
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Prepare solutions using low retention pipette tips and rotate end-over-end for 20 min at room temperature. Pipette slowly into BOND 6 mL Titration Insert to ensure accuracy and avoid generating any bubbles. Store all SignalStar kit components on ice when preparing solutions. SignalStar solutions should be used promptly once all reagents have been combined for the run. |
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For a 10 slide run, make up the total volume in a conical tube, rotate for 20 min, then divide evenly among 2 titration inserts. |
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7.4 Imaging Round 2: SignalStar Ligation Solution
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Combine the following reagents in 1 BOND Titration Insert. Cover with parafilm and vortex for 10 sec. Store all SignalStar kit components on ice when preparing solutions. SignalStar solutions should be used promptly once all reagents have been combined for the run. |
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7.5 Imaging Round 2: SignalStar Fluorescent Removal Solution
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Combine the following reagents in 1 BOND Titration Insert. Cover with parafilm and vortex for 10 sec. Store all SignalStar kit components on ice when preparing solutions. SignalStar solutions should be used promptly once all reagents have been combined for the run. |
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7.6 Additional Required Solutions Not Included
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8 SignalStar Imaging Round 2: BOND RX Protocol for Use
1. After image acquisition of SignalStar Imaging Round 1, soak slides in dH2O for >30 min to gently remove coverslip. | |
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Do not let slides dry out at any point once they are deparaffinized or have had coverslips removed. |
2. In the BOND RX software, create study and add slides. | |
3. When "adding slides," use the below selections for Tissue Preparation on BOND:
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4. Select "CST SignalStar Imaging Round 2," ensuring that Slide preparation is selected as "--" and HIER is selected as "--." | |
5. Print labels, add labels to slides, and place slides onto the slide tray. | |
6. Place 2-3 drops of dH2O onto each slide before adding BOND covertiles. | |
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IMPORTANT: Dewax and HIER (antigen retrieval) are not required for Amplification Round 2. If Dewax and HIER are used, Amplification Round 2 results will be uninterpretable. |
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It is good practice to confirm that each step in the Imaging Round 2 protocol is correct. Please use the checklist in section 9.3 to assist in creating your protocol. |
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Ensure that selected 0.1X TBST washes listed below are set to "Open." Fluorescent signals may be variable or diminished if washes are not "Open." Confirm that there are a total of 6 SignalStar Amplification Solution 1 steps and 6 SignalStar Amplification Solution 2 steps. |
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Confirm the bulk Bond Wash Solution container is full, and the waste containers are empty. |
7. Start the BOND RX run. | |
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Immediately start the BOND RX staining run, do not use a delayed start. Slides can sit overnight on the BOND RX autostainer once staining is complete. |
8. Remove slides from the BOND RX autostainer and place into 0.1X TBST. | |
9. Run aspirating probe cleaning run on the BOND RX autostainer. Clean covertiles as per routine procedures. | |
10. Prepare DAPI #4083 solution according to datasheet instructions. | |
11. Counterstain with DAPI solution. | |
12. Immerse slides in 0.1X TBST for 30 sec. | |
13. Mount slides with ProLong Gold Antifade Reagent #9071. | |
14. Image slides within 8 hr. | |
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Do not let slides dry out at any point once they are deparaffinized or have had coverslips removed. |
9 User Worksheets
9.1 SignalStar Panel Design Worksheet
Oligo-Conjugated Antibody | Complementary Oligo | Product Pair # | Imaging Round | 488 | 594 | 647 | 750 |
(See Appendix 10.1 for an example panel design.)
9.2 BOND RX Protocol Setup Checklist: Imaging Round 1
BOND Step | ✓ | Reagent | Step Type | Incubation Time (min) | Temperature (C) | Dispense Type |
1 | ☐ | *Deionized Water | Wash | 0:00 | Ambient | 150 µL |
2 | ☐ | *Deionized Water | Wash | 0:00 | Ambient | Open |
3 | ☐ | *Deionized Water | Wash | 0:00 | Ambient | 150 µL |
4 | ☐ | 0.1X TBST Solution | Wash | 0:00 | Ambient | 150 µL |
5 | ☐ | MARKER (SignalStar Imaging Round 1 Solution) | Primary | 40:00 | Ambient | 150 µL |
6 | ☐ | 1X TBST Solution | Reagent | 5:00 | Ambient | Open |
7 | ☐ | 0.1X TBST Solution | Reagent | 5:00 | Ambient | 150 µL |
8 | ☐ | 10% Neutral Buffered Formalin | Reagent | 5:00 | Ambient | 150 µL |
9 | ☐ | *Deionized Water | Wash | 0:00 | Ambient | Open |
10 | ☐ | *Deionized Water | Wash | 0:00 | Ambient | Open |
11 | ☐ | *Deionized Water | Wash | 0:00 | Ambient | 150 µL |
12 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
13 | ☐ | SignalStar Amplification Solution 1 | Reagent | 8:00 | Ambient | 150 µL |
14 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
15 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
16 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
17 | ☐ | SignalStar Amplification Solution 2 | Reagent | 16:00 | Ambient | 150 µL |
18 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
19 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
20 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
21 | ☐ | SignalStar Amplification Solution 1 | Reagent | 8:00 | Ambient | 150 µL |
22 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
23 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
24 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
25 | ☐ | SignalStar Amplification Solution 2 | Reagent | 16:00 | Ambient | 150 µL |
26 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
27 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
28 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
29 | ☐ | SignalStar Amplification Solution 1 | Reagent | 8:00 | Ambient | 150 µL |
30 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
31 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
32 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
33 | ☐ | SignalStar Amplification Solution 2 | Reagent | 16:00 | Ambient | 150 µL |
34 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
35 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
36 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
37 | ☐ | SignalStar Amplification Solution 1 | Reagent | 8:00 | Ambient | 150 µL |
38 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
39 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
40 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
41 | ☐ | SignalStar Amplification Solution 2 | Reagent | 16:00 | Ambient | 150 µL |
42 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
43 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
44 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
45 | ☐ | SignalStar Amplification Solution 1 | Reagent | 8:00 | Ambient | 150 µL |
46 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
47 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
48 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
49 | ☐ | SignalStar Amplification Solution 2 | Reagent | 16:00 | Ambient | 150 µL |
50 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
51 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
52 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
53 | ☐ | SignalStar Amplification Solution 1 | Reagent | 8:00 | Ambient | 150 µL |
54 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
55 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
56 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
57 | ☐ | SignalStar Amplification Solution 2 | Reagent | 16:00 | Ambient | 150 µL |
58 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
59 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
60 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
61 | ☐ | SignalStar Ligation Solution | Reagent | 20:00 | Ambient | 150 µL |
62 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
63 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
64 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
65 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
66 | ☐ | BOND Wash Solution | Wash | 0:00 | Ambient | 150 µL |
9.3 BOND RX Protocol Setup Checklist: Imaging Round 2
BOND Step | ✓ | Reagent | Step Type | Incubation Time (min) | Temperature (C) | Dispense Type |
1 | ☐ | 0.1X TBST Solution | Wash | 0:00 | Ambient | Open |
2 | ☐ | 0.1X TBST Solution | Wash | 0:00 | Ambient | Open |
3 | ☐ | SignalStar Stripping Buffer | Reagent | 60:00 | 37° | 150 µL |
4 | ☐ | SignalStar Stripping Buffer | Reagent | 60:00 | 37° | 150 µL |
5 | ☐ | *Deionized Water | Wash | 0:00 | Ambient | Open |
6 | ☐ | *Deionized Water | Wash | 0:00 | Ambient | Open |
7 | ☐ | *Deionized Water | Wash | 0:00 | Ambient | Open |
8 | ☐ | MARKER (SignalStar Imaging Round 2 Solution) | Primary | 40:00 | Ambient | 150 µL |
9 | ☐ | 1X TBST Solution | Reagent | 5:00 | Ambient | Open |
10 | ☐ | 0.1X TBST Solution | Reagent | 5:00 | Ambient | Open |
11 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
12 | ☐ | SignalStar Amplification Solution 1 | Reagent | 8:00 | Ambient | 150 µL |
13 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
14 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
15 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
16 | ☐ | SignalStar Amplification Solution 2 | Reagent | 16:00 | Ambient | 150 µL |
17 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
18 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
19 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
20 | ☐ | SignalStar Amplification Solution 1 | Reagent | 8:00 | Ambient | 150 µL |
21 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
22 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
23 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
24 | ☐ | SignalStar Amplification Solution 2 | Reagent | 16:00 | Ambient | 150 µL |
25 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
26 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
27 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
28 | ☐ | SignalStar Amplification Solution 1 | Reagent | 8:00 | Ambient | 150 µL |
29 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
30 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
31 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
32 | ☐ | SignalStar Amplification Solution 2 | Reagent | 16:00 | Ambient | 150 µL |
33 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
34 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
35 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
36 | ☐ | SignalStar Amplification Solution 1 | Reagent | 8:00 | Ambient | 150 µL |
37 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
38 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
39 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
40 | ☐ | SignalStar Amplification Solution 2 | Reagent | 16:00 | Ambient | 150 µL |
41 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
42 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
43 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
44 | ☐ | SignalStar Amplification Solution 1 | Reagent | 8:00 | Ambient | 150 µL |
45 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
46 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
47 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
48 | ☐ | SignalStar Amplification Solution 2 | Reagent | 16:00 | Ambient | 150 µL |
49 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
50 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
51 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
52 | ☐ | SignalStar Amplification Solution 1 | Reagent | 8:00 | Ambient | 150 µL |
53 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
54 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
55 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
56 | ☐ | SignalStar Amplification Solution 2 | Reagent | 16:00 | Ambient | 150 µL |
57 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
58 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
59 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
60 | ☐ | SignalStar Ligation Solution | Reagent | 20:00 | Ambient | 150 µL |
61 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
62 | ☐ | 0.1X TBST Solution | Reagent | 0:00 | Ambient | Open |
63 | BOND Wash Solution | Wash | 0:00 | Ambient | 150 µL |
10 Appendix
10.1 Example SignalStar Panel Design
Oligo-Conjugated Antibody | Complementary Oligo | Product Pair # | Imaging Round | 488 | 594 | 647 | 750 |
PD-1 (Intracellular Domain) (D4W2J) XP® Rabbit mAb (SignalStar™ Conjugate 0008) |
Complementary Oligo (CO-0008-488) |
17942 | 1 | ● | |||
PD-L1 (E1L3N®) XP® Rabbit mAb (SignalStar™ Conjugate 0005) |
Complementary Oligo (CO-0005-594) |
28249 | 1 | ● | |||
TIM-3 (D5D5R™) XP® Rabbit mAb (SignalStar™ Conjugate 0010) |
Complementary Oligo (CO-0010-647) |
15231 | 1 | ● | |||
Ki-67 (8D5) Mouse mAb (SignalStar™ Conjugate 0014) |
Complementary Oligo (CO-0014-750) |
56398 | 1 | ● | |||
CD8ɑ (D8A8Y) Rabbit mAb (SignalStar™ Conjugate 0004) |
Complementary Oligo (CO-0004-488) |
45747 | 2 | ● | |||
CD68 (D4B9C) XP® Rabbit mAb (SignalStar™ Conjugate 0007) |
Complementary Oligo (CO-0007-594) |
77318 | 2 | ● | |||
CD20 (E7B7T) XP® Rabbit mAb (SignalStar™ Conjugate 0011) |
Complementary Oligo (CO-0011-647) |
36775 | 2 | ● | |||
Pan-Keratin (C11) Mouse mAb (SignalStar™ Conjugate 0003) |
Complementary Oligo (CO-0003-750) |
97227 | 2 | ● |
10.2 Troubleshooting and Frequently Asked Questions
How are the SignalStar Multiplex IHC Kits & Reagents validated?
CST thoroughly validates each antibody available in the SignalStar Multiplex IHC Panel Builder menu. Various combinations of antibodies are tested through titration and fluorophore pairing, and in both rounds of imaging. Testing is performed on a variety of tumors and tissue types. We also rigorously test the parent antibodies used in the traditional chromogenic assay, as they serve as the foundation of this fluorescent assay.
Does this assay work on frozen tissue?
SignalStar Multiplex IHC Kits & Reagents haven't yet been validated for use in frozen tissues. We're in the process of validating our antibodies and protocols for use in fresh or frozen tissue.
Do you have anti-mouse antibodies available?
SignalStar Multiplex IHC Kits & Reagents haven't yet been validated for use in mouse tissues. We're in the process of validating mouse-reactive antibodies.
I don't see my target of interest in your menu of available antibodies. Can I still use it in my panel in some way?
SignalStar Multiplex IHC Kits & Reagents haven't yet been validated for use with antibodies outside of our menu. We're in the process of developing custom solutions for using your own antibodies in the SignalStar Multiplex IHC assay.
Can I combine antibodies used in this assay with direct conjugates?
SignalStar Multiplex IHC Kits & Reagents haven't been validated for use in combination with direct conjugates. It's likely possible to incorporate direct conjugates into your protocol. However, because the SignalStar reagents benefit from fluorescent signal amplification, there may be spectral bleed-through that results from using the assay with conjugates that are not amplified.
When comparing my SignalStar staining to the chromogenic staining on serial sections, I see more positive cells. How do I know if this excess staining is correct?
During the course of optimization, we've found that fluorescent staining may show higher %-positivity than chromogenic staining. To ensure any excess staining is specific, confirm that the correct subcellular localization and co-localization with other stains are demonstrated. For example, if all CD8+ cells are CD3+, any excess CD8+ staining compared to the chromogenic is most likely correct.
How long after the completion of staining can I wait to image my slides?
For Imaging Round 1, the staining should show robust signal when imaged up to 8 hr post completion of staining. For Imaging Round 2, imaging should be performed as close to the completion of staining as possible, but should remain robust for up to 8 hr.
Do I need to optimize the SignalStar Multiplex IHC Kits & Reagents for the type of tissue I'm using?
The SignalStar Multiplex IHC Kits & Reagents have been optimized with respect to fluorophore pairing and order of antibodies. As tissues vary in quality and expression level of targets, increasing the concentration of antibodies in your panel by 2-fold or decreasing by 0.5 fold can help achieve optimal signal in your experiments.
What is an appropriate positive control to include in this assay? Are multiple controls necessary?
Any tissue shown to be positive for each target via chromogenic IHC can serve as a positive control tissue. Each target will therefore require a positive control, which may sometimes necessitate multiple controls. For optimal comparison, the sections should be as close to serial as possible.
For Research Use Only. Not for Use in Diagnostic Procedures.
Cell Signaling Technology, XP, and SignalStar are trademarks of Cell Signaling Technology, Inc.
E1L3N is a registered trademark of Cell Signaling Technology, Inc. Cy and CyDye are registered trademarks of GE Healthcare. All other trademarks are the property of their respective owners. Visit our Trademark Information page.
© 2023 Cell Signaling Technology, Inc. All Rights Reserved.
posted July 2023
Product Information:
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Storage: Store all kit components at -20°C. Stability: All components in this kit are stable for at least 12 months when stored at the recommended temperature. Do not exceed 5 freeze/thaw cycles. Application: The SignalStar kits are intended for fluorescent multiplex immunohistochemistry. Slide Number: This kit contains sufficient materials for the staining of 10 slides. |

Contents
- 1 Introduction: The SignalStar™ Staining Methodology
- 2 Solutions and Reagents
- 3 Important Considerations Before You Begin
- 4 SignalStar Imaging Round 1: Solution Preparation
- 5 SignalStar Imaging Round 1: Protocol for Use
- 6 SignalStar Imaging Round 2: Solution Preparation
- 7 SignalStar Imaging Round 2: Protocol for Use
- 8 User Worksheets
- 9 Appendix
1 Introduction: The SignalStar™ Staining Methodology
SignalStar™ Multiplex Immunohistochemistry (mIHC) is a technology that employs antibodies, oligonucleotides (oligos), and fluorophores to interrogate cellular presence, location, function, and biomarker co-expression patterns. SignalStar technology enables the detection of multiple phenotypic and functional targets while maintaining spatial context and tissue architecture. These insights are essential for understanding how cells organize and interact to influence the tissue microenvironment and drive disease progression and response to therapy.
The power of the SignalStar system lies in the design of the SignalStar antibodies. These antibodies have been rigorously validated for use in formalin-fixed, paraffin-embedded (FFPE) tissues, and subsequently conjugated to unique oligo tags using site-specific conjugation and thorough purification methodologies. Using a highly specific network of complementary oligos and fluorophores, scientists can amplify the signal for 3-8 targets, even if they are in low abundance.

Figure 1. All antibodies in your plex size of choice (3-8 maximum unique oligo-conjugated antibodies) are added in cocktail in one primary incubation step. Complementary oligos with fluorescent dyes (channels: 488, 594, 647, and 750) amplify the signal of up to 4 oligo-conjugated antibodies in the first round of imaging by building oligo-fluorophore constructs attached to the antibody. If the plex size is greater than 4, the first round of oligos and fluorophores are gently removed, and a second round of amplification is performed to visualize up to 4 additional oligo-conjugated antibodies; the complementary oligo system and the use of the fluorophore removal process enables a second round of antibodies to be amplified from the same substrate, without cross-reactivity. The 2 images are then aligned and fused computationally with either proprietary or open-source software to generate an image consisting of up to 8 targets.
2 Solutions and Reagents
2.1 Included Kit Components
Materials Included in Kit |
Up to 8 SignalStar oligo-conjugated antibodies (see below) |
Up to 8 SignalStar complementary oligos (see below) |
SignalStar™ Antibody Diluent A |
SignalStar™ Antibody Diluent B |
SignalStar™ Amplification Buffer A |
SignalStar™ Amplification Buffer B |
SignalStar™ Amplification Oligo Set A: |
488 |
594 |
647 |
750 |
SignalStar™ Amplification Oligo Set B: |
488 |
594 |
647 |
750 |
SignalStar™ Ligation Buffer |
T4 DNA Ligase (5 U/µL) |
ATP (100 mM) |
10X dsDNase Buffer |
dsDNase |
Included are up to 8 SignalStar oligo-conjugated antibodies (A) and up to 8 SignalStar complementary oligos (B) selected at the time of order and provided in sleeves with their respective oligo-antibody pair (C). See example below.
2.2 Required Reagents Not Included
- SignalStain® EDTA Unmasking Solution (10X) #14747
- Xylene (for deparaffinization)
- Ethanol, anhydrous denatured, histological grade (100% and 95%)
- Decloaking Chamber (Biocare Medical, #DC2012)
- Tris Buffered Saline with Tween 20 (TBST-10X) #9997
- DAPI #4083
- ProLong Gold Antifade Reagent #9071
- Nuclease-free Water #12931
- 10% Neutral Buffered Formalin
- Low Retention Pipette Tips
- Slide Processing Containers
- Hydrophobic Barrier Pen
- Glass Coverslips
- Charged Slides
- Control Tissues
3 Important Considerations Before You Begin
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PLEASE READ SOLUTION PREPARATION AND PROTOCOL IN ITS ENTIRETY PRIOR TO SETTING UP YOUR EXPERIMENT. |
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DO NOT COMBINE COMPLEMENTARY OLIGOS OF THE SAME FLUORESCENT CHANNEL. Imaging rounds can contain only 1 complementary oligo for each fluorescent channel. DO NOT COMBINE COMPLEMENTARY OLIGOS SPECIFIC TO THE SAME FLUORESCENT CHANNEL IN THE SAME IMAGING ROUND, AS IT WILL RENDER THE ASSAY RESULTS UNINTERPRETABLE. |
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DO NOT COMBINE ANTIBODIES FROM DIFFERENT PANELS. If you are running multiple panels simultaneously, a separate antibody/complementary oligo mix must be generated for each unique panel. |
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SOME SIGNALSTAR KIT COMPONENTS ARE VISCOUS. FLUORESCENT SIGNAL MAY BE VARIABLE OR DIMINISHED IF SOLUTIONS ARE NOT ACCURATELY MEASURED OR SUFFICIENTLY MIXED. Combine SignalStar kit components in 15 mL conical tubes using low retention pipette tips. Pipette slowly to ensure accuracy. Rotate end-over-end for 20 min at room temperature. Store all SignalStar kit components on ice when not in use. Once combined, SignalStar solutions should be kept at room temperature and used promptly. |
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Please confirm whether your SignalStar panel design requires 2 rounds of imaging. Utilize the SignalStar Panel Design and SignalStar Panel Design Worksheet in section 9.1 and 8.1 of this document for guidance and assistance. |
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Slides should be imaged within 8 hr of staining completion. Fluorescent signal may be diminished if slides are not imaged within this timeframe. |
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Confirm your microscope can detect the fluorophores provided in this kit. When imaging, there are 4 fluorescent channels in addition to DAPI that need to be acquired. |
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It is recommended that a spectral library be created by imaging single stained slides for the spectra described above. This will enable better unmixing to help minimize the possibility of spectral bleed-through. |
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Usage of a DAPI concentrate is recommended rather than a mount that contains DAPI. Bright DAPI staining facilitates better image alignment. |
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Results are not guaranteed if there is any deviation from this protocol. The SignalStar protocol was developed and optimized with the designated antigen retrieval and staining steps. |
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The usage of a positive control slide is recommended. A tissue upon which chromogenic staining has confirmed the presence of all targets in the multiplex panel should be included in each run. |
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It is recommended that each antibody be used at 1:100. However, enough antibody reagent is supplied for usage at either 1:50 or 1:200 dilutions. |
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Drain off the incubation solutions and dH2O as much as possible throughout the staining process without allowing slides to dry out. Thoroughly flick liquid off from every slide after each step before continuing to the next. |
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The following SignalStar kit components can be thawed overnight at 4C prior to use:
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4 SignalStar Imaging Round 1: Solution Preparation
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EACH SOLUTION SHOULD BE CREATED FRESH AND USED PROMPTLY. Please read SignalStar Imaging Round 1: Protocol for Use in section 5 in its entirety prior to creating solutions. |
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SignalStar kit components should be thawed at room temperature immediately prior to use unless otherwise indicated, and then stored on ice while in use. |
4.1 Imaging Round 1: SignalStar Solution
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Once prepared, the SignalStar Imaging Round 1 Solution should contain ALL antibodies (up to 8) ordered with your kit (including those for Imaging Round 1 and Imaging Round 2) and the complementary oligos for Imaging Round 1. Utilize the Example SignalStar Panel Design and SignalStar Panel Design Worksheet in section 9.1 and 8.1 of this document for guidance and assistance. |
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DO NOT COMBINE COMPLEMENTARY OLIGOS OF THE SAME FLUORESCENT CHANNEL. Do not combine complementary oligos from Imaging Round 1 and Imaging Round 2. |
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SIGNALSTAR ANTIBODY DILUENTS ARE VISCOUS. FLUORESCENT SIGNAL MAY BE VARIABLE OR DIMINISHED IF SOLUTIONS ARE NOT ACCURATELY MEASURED OR SUFFICIENTLY MIXED. Combine SignalStar kit components in 15 mL conical tubes using low retention pipette tips. Pipette slowly to ensure accuracy. Rotate end-over-end for 20 min at room temperature. Store all SignalStar kit components on ice when not in use. Once combined, SignalStar solutions should be kept at room temperature and used promptly. |
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4.2 Imaging Round 1: SignalStar Amplification Solution 1
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SIGNALSTAR AMPLIFICATION BUFFERS ARE VISCOUS. FLUORESCENT SIGNAL MAY BE VARIABLE OR DIMINISHED IF SOLUTIONS ARE NOT ACCURATELY MEASURED OR SUFFICIENTLY MIXED. Combine SignalStar kit components in 15 mL conical tubes using low retention pipette tips. Pipette slowly to ensure accuracy. Rotate end-over-end for 20 min at room temperature. Store all SignalStar kit components on ice when not in use. Once combined, SignalStar solutions should be kept at room temperature and used promptly. |
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4.3 Imaging Round 1: SignalStar Amplification Solution 2
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SIGNALSTAR AMPLIFICATION BUFFERS ARE VISCOUS. FLUORESCENT SIGNAL MAY BE VARIABLE OR DIMINISHED IF SOLUTIONS ARE NOT ACCURATELY MEASURED OR SUFFICIENTLY MIXED. Combine SignalStar kit components in 15 mL conical tubes using low retention pipette tips. Pipette slowly to ensure accuracy. Rotate end-over-end for 20 min at room temperature. Store all SignalStar kit components on ice when not in use. Once combined, SignalStar solutions should be kept at room temperature and used promptly. |
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4.4 Imaging Round 1: SignalStar Ligation Solution
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Store all SignalStar kit components on ice when preparing solutions. Once combined, SignalStar solutions should be kept at room temperature and used promptly. |
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4.5 Additional Required Solutions Not Included
- 1X EDTA Unmasking Solution: To prepare 250 mL of 1X EDTA Unmasking Solution, dilute 25 mL of SignalStain® EDTA Unmasking Solution (10X) #14747 with 225 mL of dH2O.
- 10% Neutral Buffered Formalin
- 1X Tris Buffered Saline with Tween 20 (TBST): To prepare 1 L 1X TBST, add 10 mL Tris Buffered Saline with Tween 20 (TBST-10X) #9997 to 900 mL of dH2O, mix.
5 SignalStar Imaging Round 1: Protocol for Use
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EACH SOLUTION SHOULD BE CREATED FRESH AND USED PROMPTLY. Please read SignalStar Imaging Round 1: Protocol for Use in section 5 in its entirety prior to creating solutions. |
5.1 Slide Baking
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Slide baking can be performed the day before you begin your experiment. This step allows for the paraffin wax to melt and the tissue better adhere to the slide. |
1. Incubate slides for 30 min at 60°C. |
5.2 Deparaffinization/Hydration
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Do not let slides dry out at any point once they are deparaffinized. Use a humidified chamber for all incubation steps. Make sure each solution covers the entirety of the tissue. |
2. Incubate sections in 3 washes of xylene for 5 min each. |
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3. Incubate sections in 2 washes of 100% ethanol for 10 min each. |
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4. Incubate sections in 2 washes of 95% ethanol for 10 min each. |
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5. Wash sections 2 times in dH2O for 5 min each. |
5.3 Antigen Unmasking
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EDTA antigen retrieval in a pressure cooker is recommended to maximize retrieval of epitopes. This protocol describes the conditions that are recommended for the Biocare Medical Decloaking Chamber #DC2012. Device-specific settings and operating instructions should be utilized for other pressure cookers. |
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7. Place 500 mL dH2O into the pressure cooker. |
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8. Place the slide holder into the pressure cooker, touching the heat shield. Partially cover with a slide container lid. |
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It may be advantageous to place a second 24-slide holder filled with 250 mL water and blank slides into the pressure cooker, and partially cover with a lid. |
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9. Seal the chamber and proceed with retrieval. Settings for the Biocare Medical Decloaking Chamber #DC2012 are 110°C for 30 min. |
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10. Carefully vent the device, then remove the lid. |
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11. Remove the slide container from the decloaking chamber and allow to cool on the bench top for 10 min. |
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5.4 Imaging Round 1: Staining
13. Incubate slides in 150 µL of SignalStar Imaging Round 1 Solution for 40 min at room temperature. |
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Slides can alternatively be incubated in SignalStar Imaging Round 1 Solution overnight at 4°C in order to break up the protocol into multiple days. |
14. Thoroughly flick off liquid from slides and immerse in 1X TBST for 30 sec. |
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15. Incubate slides in 10% Neutral Buffered Formalin for 5 min at room temperature. |
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16. Thoroughly flick off liquid from slides and immerse in dH2O for 30 sec. |
5.5 Imaging Round 1: Amplification
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5.6 Imaging Round 1: Ligation
18. Incubate slides in 150 µL of SignalStar Ligation Buffer for 20 min at room temperature. |
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19. Thoroughly flick off liquid from slides and immerse in dH2O for 30 sec. |
5.7 Imaging Round 1: Image
20. Prepare DAPI #4083 solution according to datasheet instructions. |
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21. Immerse slides in 1X TBST for 30 sec. |
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22. Counterstain with DAPI solution. |
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23. Immerse slides in 1X TBST for 30 sec. |
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24. Mount slides with ProLong Gold Antifade Reagent #9071. |
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25. Image slides as soon as possible. Signal should remain robust for up to 8 hr. |
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Once imaging is complete, fluorescent signal can be removed from slides so that another round of imaging can be performed. Perform Imaging Round 2 as soon as possible following the first round of imaging. |
6 SignalStar Imaging Round 2: Solution Preparation
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EACH SOLUTION SHOULD BE CREATED FRESH AND USED PROMPTLY. Please read SignalStar Imaging Round 2: Protocol for Use in section 7 in its entirety prior to creating solutions. |
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SIGNALSTAR IMAGING ROUND 2 IS ONLY NEEDED FOR ANTIBODY PANELS THAT REQUIRE TWO IMAGING ROUNDS. Utilize the Example SignalStar Panel Design and SignalStar Panel Design Worksheet in section 9.1 and 8.1 of this document for guidance and assistance. |
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SignalStar kit components should be thawed at room temperature immediately prior to use unless otherwise indicated, and then stored on ice while in use. |
6.1 Imaging Round 2: SignalStar Fluorescent Removal Solution
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Store all SignalStar kit components on ice when preparing solutions. Once combined, SignalStar solutions should be kept at room temperature and used promptly. |
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6.2 Imaging Round 2: SignalStar Solution
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Once prepared, the SignalStar Imaging Round 2 Solution should contain only the complementary oligos for Imaging Round 2. Utilize the Example SignalStar Panel Design and SignalStar Panel Design Worksheet in section 9.1 and 8.1 of this document for guidance and assistance. |
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NO SIGNALSTAR CONJUGATES ARE ADDED TO THE IMAGING ROUND 2 SOLUTION. |
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DO NOT COMBINE COMPLEMENTARY OLIGOS OF THE SAME FLUORESCENT CHANNEL. Do not combine complementary oligos from Imaging Round 1 and Imaging Round 2. |
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SIGNALSTAR ANTIBODY DILUENTS ARE VISCOUS. FLUORESCENT SIGNAL MAY BE VARIABLE OR DIMINISHED IF SOLUTIONS ARE NOT ACCURATELY MEASURED OR SUFFICIENTLY MIXED. Combine SignalStar kit components in 15 mL conical tubes using low retention pipette tips. Pipette slowly to ensure accuracy. Rotate end-over-end for 20 min at room temperature. Store all SignalStar kit components on ice when not in use. Once combined, SignalStar solutions should be kept at room temperature and used promptly. |
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6.3 Imaging Round 2: SignalStar Amplification Solution 1
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SIGNALSTAR ANTIBODY DILUENTS ARE VISCOUS. FLUORESCENT SIGNAL MAY BE VARIABLE OR DIMINISHED IF SOLUTIONS ARE NOT ACCURATELY MEASURED OR SUFFICIENTLY MIXED. Combine SignalStar kit components in 15 mL conical tubes using low retention pipette tips. Pipette slowly to ensure accuracy. Rotate end-over-end for 20 min at room temperature. Store all SignalStar kit components on ice when not in use. Once combined, SignalStar solutions should be kept at room temperature and used promptly. |
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6.4 Imaging Round 2: SignalStar Amplification Solution 2
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SIGNALSTAR ANTIBODY DILUENTS ARE VISCOUS. FLUORESCENT SIGNAL MAY BE VARIABLE OR DIMINISHED IF SOLUTIONS ARE NOT ACCURATELY MEASURED OR SUFFICIENTLY MIXED. Combine SignalStar kit components in 15 mL conical tubes using low retention pipette tips. Pipette slowly to ensure accuracy. Rotate end-over-end for 20 min at room temperature. Store all SignalStar kit components on ice when not in use. Once combined, SignalStar solutions should be kept at room temperature and used promptly. |
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6.5 Imaging Round 2: SignalStar Ligation Solution
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Store all SignalStar kit components on ice when preparing solutions. Once combined, SignalStar solutions should be kept at room temperature and used promptly. |
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7 SignalStar Imaging Round 2: Protocol for Use
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EACH SOLUTION SHOULD BE CREATED FRESH AND USED PROMPTLY. Please read SignalStar Imaging Round 2: Protocol for Use in section 7 in its entirety prior to creating solutions. |
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SIGNALSTAR IMAGING ROUND 2 IS ONLY NEEDED FOR ANTIBODY PANELS THAT REQUIRE TWO IMAGING ROUNDS. Utilize the Example SignalStar Panel Design and SignalStar Panel Design Worksheet in section 9.1 and 8.1 of this document for guidance and assistance. |
7.1 Removal of Fluorescent Signal
1. After image acquisition, soak slides in dH2O for ≥30 min to gently remove coverslips without damaging tissue. |
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2. Incubate slides in 150 µL of Fluorescence Removal Solution for 2 hr at 37°C. |
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3. Immerse slides in dH2O for 30 sec. |
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4. Optional: |
7.2 Imaging Round 2: Staining
5. Incubate slides in 150 µL of SignalStar Imaging Round 2 Solution for 40 min at room temperature. |
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6. Thoroughly flick off liquid from slides and immerse in dH2O for 30 sec. |
7.3 Imaging Round 2: Amplification
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7.4 Imaging Round 2: Ligation
8. Incubate slides in 150 µL of SignalStar Ligation Buffer for 20 min at room temperature. |
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9. Thoroughly flick off liquid from slides and immerse in dH2O for 30 sec. |
7.5 Imaging Round 2: Image
10. Prepare DAPI #4083 solution according to datasheet instructions. |
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11. Immerse slides in 1X TBST for 30 sec. |
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12. Counterstain with DAPI solution. |
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13. Immerse slides in 1X TBST for 30 sec. |
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14. Thoroughly flick off liquid from slides and immerse in dH2O for 30 sec. |
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15. Mount slides with ProLong Gold Antifade Reagent #9071. |
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16. Image slides as soon as possible. Signal should remain robust for up to 8 hr. |
8 User Worksheets
8.1 SignalStar Panel Design Worksheet
Oligo-Conjugated Antibody | Complementary Oligo | Imaging Round | 488 | 594 | 647 | 750 |
(See Appendix 9.1 for an example panel design.)
8.2 SignalStar Imaging Round 1 Checklist
Amplification Round | Step # | ✓ | Step |
Amplification Round 1 | 1 | ☐ | Incubate in Amplification Solution 1 for 8 min. |
2 | ☐ | Immerse slides in dH2O for 30 sec. | |
3 | ☐ | Incubate in Amplification Solution 2 for 8 min. | |
4 | ☐ | Immerse slides in dH2O for 30 sec. | |
Amplification Round 2 | 5 | ☐ | Incubate in Amplification Solution 1 for 8 min. |
6 | ☐ | Immerse slides in dH2O for 30 sec. | |
7 | ☐ | Incubate in Amplification Solution 2 for 8 min. | |
8 | ☐ | Immerse slides in dH2O for 30 sec. | |
Amplification Round 3 | 9 | ☐ | Incubate in Amplification Solution 1 for 8 min. |
10 | ☐ | Immerse slides in dH2O for 30 sec. | |
11 | ☐ | Incubate in Amplification Solution 2 for 8 min. | |
12 | ☐ | Immerse slides in dH2O for 30 sec. | |
Amplification Round 4 | 13 | ☐ | Incubate in Amplification Solution 1 for 8 min. |
14 | ☐ | Immerse slides in dH2O for 30 sec. | |
15 | ☐ | Incubate in Amplification Solution 2 for 8 min. | |
16 | ☐ | Immerse slides in dH2O for 30 sec. | |
Amplification Round 5 | 17 | ☐ | Incubate in Amplification Solution 1 for 8 min. |
18 | ☐ | Immerse slides in dH2O for 30 sec. | |
19 | ☐ | Incubate in Amplification Solution 2 for 8 min. | |
20 | ☐ | Immerse slides in dH2O for 30 sec. | |
Amplification Round 6 | 21 | ☐ | Incubate in Amplification Solution 1 for 8 min. |
22 | ☐ | Immerse slides in dH2O for 30 sec. | |
23 | ☐ | Incubate in Amplification Solution 2 for 8 min. | |
24 | ☐ | Immerse slides in dH2O for 30 sec. | |
Amplification Round 7 | 25 | ☐ | Incubate in Amplification Solution 1 for 8 min. |
26 | ☐ | Immerse slides in dH2O for 30 sec. | |
27 | ☐ | Incubate in Amplification Solution 2 for 8 min. | |
28 | ☐ | Immerse slides in dH2O for 30 sec. | |
Amplification Round 8 | 29 | ☐ | Incubate in Amplification Solution 1 for 8 min. |
30 | ☐ | Immerse slides in dH2O for 30 sec. | |
31 | ☐ | Incubate in Amplification Solution 2 for 8 min. | |
32 | ☐ | Immerse slides in dH2O for 30 sec. |
8.3 SignalStar Imaging Round 2 Checklist
Amplification Round | Step # | ✓ | Step |
Amplification Round 1 | 1 | ☐ | Incubate in Amplification Solution 1 for 8 min. |
2 | ☐ | Immerse slides in dH2O for 30 sec. | |
3 | ☐ | Incubate in Amplification Solution 2 for 8 min. | |
4 | ☐ | Immerse slides in dH2O for 30 sec. | |
Amplification Round 2 | 5 | ☐ | Incubate in Amplification Solution 1 for 8 min. |
6 | ☐ | Immerse slides in dH2O for 30 sec. | |
7 | ☐ | Incubate in Amplification Solution 2 for 8 min. | |
8 | ☐ | Immerse slides in dH2O for 30 sec. | |
Amplification Round 3 | 9 | ☐ | Incubate in Amplification Solution 1 for 8 min. |
10 | ☐ | Immerse slides in dH2O for 30 sec. | |
11 | ☐ | Incubate in Amplification Solution 2 for 8 min. | |
12 | ☐ | Immerse slides in dH2O for 30 sec. | |
Amplification Round 4 | 13 | ☐ | Incubate in Amplification Solution 1 for 8 min. |
14 | ☐ | Immerse slides in dH2O for 30 sec. | |
15 | ☐ | Incubate in Amplification Solution 2 for 8 min. | |
16 | ☐ | Immerse slides in dH2O for 30 sec. | |
Amplification Round 5 | 17 | ☐ | Incubate in Amplification Solution 1 for 8 min. |
18 | ☐ | Immerse slides in dH2O for 30 sec. | |
19 | ☐ | Incubate in Amplification Solution 2 for 8 min. | |
20 | ☐ | Immerse slides in dH2O for 30 sec. | |
Amplification Round 6 | 21 | ☐ | Incubate in Amplification Solution 1 for 8 min. |
22 | ☐ | Immerse slides in dH2O for 30 sec. | |
23 | ☐ | Incubate in Amplification Solution 2 for 8 min. | |
24 | ☐ | Immerse slides in dH2O for 30 sec. | |
Amplification Round 7 | 25 | ☐ | Incubate in Amplification Solution 1 for 8 min. |
26 | ☐ | Immerse slides in dH2O for 30 sec. | |
27 | ☐ | Incubate in Amplification Solution 2 for 8 min. | |
28 | ☐ | Immerse slides in dH2O for 30 sec. | |
Amplification Round 8 | 29 | ☐ | Incubate in Amplification Solution 1 for 8 min. |
30 | ☐ | Immerse slides in dH2O for 30 sec. | |
31 | ☐ | Incubate in Amplification Solution 2 for 8 min. | |
32 | ☐ | Immerse slides in dH2O for 30 sec. |
9 Appendix
9.1 Example SignalStar Panel Design
Oligo-Conjugated Antibody | Complementary Oligo | Product Pair # | Imaging Round | 488 | 594 | 647 | 750 |
PD-1 (Intracellular Domain) (D4W2J) XP® Rabbit mAb (SignalStar™ Conjugate 0008) | Complementary Oligo (CO-0008-488) |
17942 | 1 | ● | |||
PD-L1 (E1L3N®) XP® Rabbit mAb (SignalStar™ Conjugate 0005) | Complementary Oligo (CO-0005-594) |
28249 | 1 | ● | |||
TIM-3 (D5D5R™) XP® Rabbit mAb (SignalStar™ Conjugate 0010) | Complementary Oligo (CO-0010-647) |
15231 | 1 | ● | |||
Ki-67 (8D5) Mouse mAb (SignalStar™ Conjugate 0014) | Complementary Oligo (CO-0014-750) |
56398 | 1 | ● | |||
CD8ɑ (D8A8Y) Rabbit mAb (SignalStar™ Conjugate 0004) | Complementary Oligo (CO-0004-488) |
45747 | 2 | ● | |||
CD68 (D4B9C) XP® Rabbit mAb (SignalStar™ Conjugate 0007) | Complementary Oligo (CO-0007-594) |
77318 | 2 | ● | |||
CD20 (E7B7T) XP® Rabbit mAb (SignalStar™ Conjugate 0011) | Complementary Oligo (CO-0011-647) |
36775 | 2 | ● | |||
Pan-Keratin (C11) Mouse mAb (SignalStar™ Conjugate 0003) | Complementary Oligo (CO-0003-750) |
97227 | 2 | ● |
9.2 Troubleshooting and Frequently Asked Questions
How are the SignalStar Multiplex IHC Kits & Reagents validated?
CST thoroughly validates each antibody available in the SignalStar Multiplex IHC Panel Builder menu. Various combinations of antibodies are tested through titration and fluorophore pairing, and in both rounds of imaging. Testing is performed on a variety of tumors and tissue types. We also rigorously test the parent antibodies used in the traditional chromogenic assay, as they serve as the foundation of this fluorescent assay. We are not able to test all multiplex configurations or tissues. Please contact customer support if you have any questions.
Does this assay work on frozen tissue?
SignalStar Multiplex IHC Kits & Reagents haven’t yet been validated for use in frozen tissues.
Do you have mouse-reactive antibodies available?
Yes, please select “Mouse” in the first step of the SignalStar Multiplex IHC Panel Builder to see our mouse-reactive menu.
I don’t see my target of interest in your menu of available antibodies. Can I still use it in my panel in some way?
SignalStar Multiplex IHC Kits & Reagents haven’t yet been validated for use with antibodies outside of our menu. We’re in the process of developing custom solutions for using your own antibodies in the SignalStar Multiplex IHC assay.
SignalStar mIHC is a non-destructive technology. Therefore, in order to use your antibodies of interest, you may perform direct immunofluorescence on the same tissue after the SignalStar assay. The SignalStar™ Fluorescence Removal Kit #32722 enables you to remove the fluorescent oligos after SignalStar mIHC in order to stain and visualize direct immunofluorescence.
Can I combine antibodies used in this assay with direct conjugates?
SignalStar Multiplex IHC Kits & Reagents have been validated for use in combination with direct conjugates. The SignalStar™ Fluorescence Removal Kit #32722 enables you to remove the fluorescent oligos after SignalStar mIHC in order to stain and visualize direct immunofluorescence directly after SignalStar mIHC. We have found that many direct conjugates against strong cell surface markers work well when used in this manner. Please see our recent poster presented at AACR this past spring for more information. In addition, please see our line of directly conjugated antibodies for use in direct immunofluorescence imaging.
When comparing my SignalStar staining to the chromogenic staining on serial sections, I see more positive cells. How do I know if this excess staining is correct?
During the course of optimization, we’ve found that fluorescent staining may show higher %-positivity than chromogenic staining. To ensure any excess staining is specific, confirm that the correct subcellular localization and co-localization with other stains are demonstrated. For example, if all CD8+ cells are CD3+, any excess CD8+ staining compared to the chromogenic is most likely correct.
How long after the completion of staining can I wait to image my slides?
For Imaging Round 1, the staining should show robust signal when imaged up to 8 hr post completion of staining. For Imaging Round 2, imaging should be performed as close to the completion of staining as possible, but should remain robust for up to 8 hr.
Do I need to optimize the SignalStar Multiplex IHC Kits & Reagents for the type of tissue I’m using?
The SignalStar Multiplex IHC Kits & Reagents have been optimized with respect to fluorophore pairing and order of antibodies. As tissues vary in quality and expression level of targets, increasing the concentration of antibodies in your panel by 2-fold or decreasing by 0.5 fold can help achieve optimal signal in your experiments.
What is an appropriate positive control to include in this assay? Are multiple controls necessary?
Any tissue shown to be positive for each target via chromogenic IHC can serve as a positive control tissue. Each target will therefore require a positive control, which may sometimes necessitate multiple controls. For optimal comparison, the sections should be as close to serial as possible.
Can I perform alternative antigen retrieval methods than those provided in the protocol?
For optimal results, we do not recommend deviating from the SignalStar protocols. However, if you do not have access to the antigen retrieval method detailed in the protocol, you may try using a microwave, which has shown to result in reduced fluorescent signal. We do not recommend using a microwave when detecting low abundance targets, and we cannot guarantee your result.
To perform antigen retrieve using a microwave:
Prepare 1X EDTA Unmasking Solution: To prepare 250 mL of 1X EDTA unmasking solution, dilute 25 ml of SignalStain® EDTA Unmasking Solution (10X) (#14747) with 225 mL of dH2O. Heat slides in a microwave submersed in 1X EDTA unmasking solution until boiling is initiated (~2.5 minutes at power level 10). Follow with 15 min at a sub-boiling temperature (95°-98°C). In most common microwaves, this equates to 8 minutes at power level 3, then 7 minutes power level 2. Then remove from the microwave and place the container of slides under a dH2O faucet and add water directly to the slide container until all EDTA is replaced by dH2O. No cooling is necessary.
I am looking to run this assay on adipose tissue / brain / normal kidney which has a high level of autofluorescence. Do you have any example data that you can provide me to demonstrate that this assay will work in this tissue type?
While we utilize a wide variety of tumor and tissue types during the course of our optimization process, we cannot account for all tissues and expression levels. This assay should work in FFPE tissue 4-5 uM in thickness, assuming that our recommended protocol is followed. Furthermore, due to the high level of amplification that this assay provides, even very high autofluorescence levels may be overcome with the resulting strong, specific signal.
Can I use an alternative mounting reagent instead of ProLong Gold Antifade Reagent #9071?
Prolong Antifade mounting media are optimal for this protocol. Internal testing has demonstrated that SlowFade Antifade Reagents can negatively impact signal intensity.
For Research Use Only. Not for Use in Diagnostic Procedures.
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posted July 2023